These mini zucchini muffins are soft, moist, and lightly sweet with a tender texture that’s perfect for little hands and lunchboxes. Made with oat flour, shredded zucchini, Greek yogurt, and optional chopped nuts, these wholesome mini muffins make a simple, veggie-packed breakfast or snack you can prepare ahead for busy mornings.

If you want a straightforward muffin that hides veggies while staying flavorful, these mini zucchini muffins are an excellent choice. The shredded zucchini blends into the batter to add natural moisture without a strong vegetable taste, while oat flour creates a soft, hearty crumb. Baked in a mini muffin pan, they’re ideal for portion control and easy meal prep.
For more veggie-forward baking ideas, consider simple combinations like spinach and banana in a smoothie, carrot-banana muffins, or baked carrot cake donuts for occasional treats. These pair well with the mini zucchini muffins for varied, kid-friendly breakfasts and snacks throughout the week.
Table of Contents
- What You’ll Need
- Ingredient Substitutions & Additions
- Step-by-Step Instructions
- Storage Instructions
- Tips For Success
- Frequently Asked Questions
- More Zucchini Recipes You’ll Love
- Mini Zucchini Muffins (With Oat Flour) Recipe
What You’ll Need
Here are the ingredients used to make these mini zucchini muffins. Quantities appear in the recipe card below.

- Shredded zucchini: Adds moisture and a serving of vegetables. After shredding, squeeze out excess liquid so the muffins don’t become soggy.
- Oat flour: Keeps the muffins soft and slightly hearty; you can make oat flour by blending rolled oats.
- Baking powder & baking soda: Give the muffins lift and prevent density.
- Ground cinnamon: Adds a gentle warm flavor.
- Egg: Binds the batter for structure.
- Greek yogurt: Contributes moisture, a bit of tang, and extra protein.
- Oil: Keeps the crumb tender; choose a mild-flavored oil such as avocado or light-tasting olive oil.
- Maple syrup: Natural sweetener; honey can be substituted for adults and children older than one year.
- Vanilla extract: Rounds out and enhances the flavor.
See the recipe card below for exact ingredient amounts and full directions.
Ingredient Substitutions & Additions
- Greek yogurt can be swapped for applesauce for a dairy-free option.
- Egg may be replaced with a flax egg (1 tbsp ground flaxseed + 3 tbsp water, set 5 minutes) if you need an egg-free version.
- Maple syrup can be replaced with honey for those not serving infants under 1 year.
- Oil may be substituted with melted butter for a richer flavor.
- Add-ins like finely chopped nuts, raisins, or chocolate chips can be folded in for variety. Keep nuts optional if serving to children with allergies.
Step-by-Step Instructions

STEP 1: Preheat the oven to 350°F (175°C). Prepare a 24-cup mini silicone or metal muffin pan; lightly grease metal pans if not using silicone.
STEP 2: Finely grate the zucchini. Use a clean kitchen towel or your hands to squeeze out as much excess water as possible. Removing moisture is important to prevent gummy or soggy muffins.
STEP 3: In a medium bowl, whisk together the egg, Greek yogurt, oil, maple syrup, and vanilla extract until the mixture is smooth and combined.
STEP 4: Add oat flour, baking powder, baking soda, and cinnamon. Stir gently until just combined—avoid overmixing to keep muffins tender.
STEP 5: Fold in the squeezed shredded zucchini and any optional add-ins (nuts, raisins, or chocolate chips).
STEP 6: Spoon tablespoon-sized portions of batter evenly into the prepared mini muffin pan.
STEP 7: Bake for about 15 minutes, or until the tops are set and a toothpick inserted in the center comes out clean. Allow the muffins to cool completely on a wire rack before serving or storing.
Storage Instructions
Once cooled, store the mini zucchini muffins in an airtight container at room temperature for up to 2 days or in the refrigerator for up to 5 days. To freeze, place muffins in a freezer-safe bag or container and freeze for up to 3 months. Reheat briefly in the microwave or allow to thaw at room temperature.

Tips For Success
- Be sure to squeeze excess moisture from the zucchini thoroughly—this is key to avoiding gummy muffins.
- Silicone mini muffin pans make it easy to remove muffins without sticking. If you use a metal pan, coat it with cooking spray or oil.
- This recipe yields 24 mini muffins. To make regular-sized muffins, increase the baking time by a few minutes and check for doneness with a toothpick.
- Use a mild oil such as avocado oil or an extra-light olive oil so the taste doesn’t overpower the muffins.


Frequently Asked Questions
No. The zucchini skin softens during baking and blends into the muffins without affecting texture.
Why do I need to squeeze the zucchini?
Zucchini holds a lot of water. Removing the excess moisture prevents the muffins from becoming soggy or gummy and helps them hold their shape.
More Zucchini Recipes You’ll Love

Cheesy Zucchini Fritters

Oven-Baked Zucchini Carrot Tots

Zucchini Pizza Bites

Sweet Potato Zucchini Tots
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Mini Zucchini Muffins (With Oat Flour) Recipe
Recipe Overview
Author: Lily Payen
Prep: 10 mins | Cook: 15 mins | Total: 25 mins | Yields: 24 mini muffins
These mini zucchini muffins are soft, lightly sweet, and full of gentle flavor. The oat flour produces a tender texture while shredded zucchini and Greek yogurt keep them moist and wholesome.
Ingredients
Wet Ingredients
- 1/2 cup finely shredded zucchini, packed
- 1 egg
- 1/4 cup Greek yogurt
- 1/4 cup maple syrup
- 1/4 cup mild-tasting oil
- 1/2 tsp vanilla extract
Dry Ingredients
- 1 cup oat flour
- 1 tsp baking powder
- 1/4 tsp baking soda
- 1/2 tsp ground cinnamon
- 1/2 cup add-ins (optional, e.g., finely chopped nuts)
Instructions
- Preheat the oven to 350°F (175°C) and prepare a 24-cup mini muffin pan.
- Grate the zucchini finely and squeeze out excess moisture using a towel or your hands.
- Whisk the egg, Greek yogurt, oil, maple syrup, and vanilla in a bowl until smooth.
- Stir in oat flour, baking powder, baking soda, and cinnamon just until combined.
- Fold in the squeezed zucchini and any optional add-ins.
- Spoon tablespoon-sized portions of batter into the muffin pan.
- Bake for about 15 minutes, or until a toothpick inserted into the center comes out clean. Cool fully before serving.
Notes
- This recipe makes 24 mini muffins; bake longer if making larger muffins and check for doneness.
- Silicone pans release muffins easily; for metal pans, grease well or use liners.
- To make your own oat flour, blend rolled oats in a high-speed blender until powdery.
- Choose a mild oil—extra-light olive oil, avocado oil, or light coconut oil work well. Avoid strong-tasting oils that could overpower the muffins.
Nutrition (per mini muffin, approximate)
Calories: 55 kcal; Carbohydrates: 6 g; Protein: 1 g; Fat: 3 g; Sugar: 2 g. Values are approximate and will vary with specific ingredients and add-ins.